Top 7 Locations to Visit by Boat in Malta (2026 Guide)
Exploring Malta by boat offers access to some of the clearest water, hidden caves, and quiet bays in the Mediterranean. While beaches can be reached by land, many of Malta’s finest locations are best experienced — or only accessible — by boat. Here are the top seven places to visit by boat in Malta in 2026, chosen for their beauty, water clarity, and overall experience.
1. Kissing Elephants Arch, Comino — Hidden Gem Only Accessible by Boat
The Kissing Elephants area on the south side of Comino is one of Malta’s hidden gems and can only be reached by private boat or jet ski. This spot offers:
- some of the clearest turquoise water in Malta
- peaceful snorkelling conditions
- excellent fish life
- dramatic arch formations
- quiet swimming areas far from crowds
It’s perfect for snorkelling, cliff diving (in safe designated spots), underwater photography, and relaxed swimming. Very few visitors know about this location, making it one of the most exclusive stops for any 2026 private boat itinerary.
2. Zriezaq Bay & Halfa Bay, Gozo — Crystal Water, Marine Life & Natural Mud Baths
Located on Gozo’s south coast, Zriezaq Bay and Halfa Bay are ideal for private boats and offer some of the most untouched water around the island. Highlights include:
- bright, crystal-clear water
- abundant sea bream and octopus sightings
- calm snorkelling conditions
- natural mineral mud known for skincare benefits
Benefits of the natural mud include:
- detoxifying the skin by drawing out oils and toxins
- exfoliating dead skin cells
- improving acne and eczema
- relieving muscle tension
- leaving the skin hydrated and glowing
These bays remain quiet even in peak season, making them a perfect 2026 stop for travellers seeking nature and tranquility.
3. Blue Lagoon, Comino — Famous, Busy, and Best Enjoyed by Private Boat
Blue Lagoon is Malta’s most famous swimming spot — and also the busiest. However, arriving by private boat allows you to swim in the bluest water without crowds.
A private boat can anchor in the quietest sections, away from the public jetty and large tour boats, giving you:
- crystal-clear turquoise water
- relaxed swimming zones
- ideal snorkelling across white sand patches
- access to hidden beaches near Cominotto
Blue Lagoon is beautiful, and with the right approach, you can experience it at its absolute best.
4. Crystal Lagoon, Comino — Caves, Cliff Diving & Deep Blue Water
Crystal Lagoon is one of the most spectacular locations in Malta and can only be accessed by boat. With towering cliffs, multiple sea caves, and deep blue water, it offers:
- some of the best cliff diving spots in Malta
- sheltered, calm water ideal for snorkelling
- dramatic cave formations perfect for exploring
- fewer crowds than Blue Lagoon
This lagoon is a highlight of any private boat tour in 2026 and a must-see for adventurous travellers.
5. Blue Grotto & St Peter’s Pool — South Malta’s Best Boat Spots
In 2026, private boats can now explore the Blue Grotto and St Peter’s Pool from the sea — a major improvement, as previously only short ferry boats visited the caves.
Blue Grotto:
- iconic sea cave system
- stunning blue reflections
- perfect for photos and smooth cruising
St Peter’s Pool:
- natural swimming pool carved into rock
- ideal for cliff diving
- exceptionally clear water
- great snorkelling around the reef shelf
This southern route provides a completely different landscape from Comino and is ideal for full-day private boat trips.
6. San Blas Bay, Gozo — Golden Sand & Quiet Waters
San Blas Bay in north Gozo is a charming, small golden-sand beach perfect for swimming from a private boat. It’s accessible by land, but the steep, long descent makes arriving by sea far more enjoyable.
From the boat, you can:
- jump into clear, shallow water
- swim directly to the sandy beach
- enjoy a peaceful environment
- relax near one of Gozo’s most picturesque bays
It’s much quieter than Ramla Bay and ideal for families and couples.
7. Paradise Bay, Malta — Underrated Blue Lagoon Alternative
Paradise Bay is one of Malta’s most beautiful small beaches, yet often overlooked by tourists. It offers:
- bright turquoise water
- a small sandy beach with a lido
- great snorkelling
- gentle waves and calm conditions
You can reach it by land, but the long staircase makes boat access more comfortable. It’s a fantastic Blue Lagoon alternative for those wanting a quieter experience with the same bright blue colour.
Summary — The Best Boat Locations in Malta for 2026
Whether you prefer caves, calm blue water, cliff diving, or secret bays, Malta offers world-class experiences only reachable by boat. For 2026, the top choices are:
- Kissing Elephants (Comino)
- Zriezaq & Halfa Bay (Gozo)
- Blue Lagoon
- Crystal Lagoon
- Blue Grotto & St Peter’s Pool
- San Blas Bay
- Paradise Bay
A private boat allows you to visit all seven locations in comfort, with custom routes and access to quiet swimming areas far from the crowds.
Book a Private Boat for 2026
For travellers who want to explore Malta’s hidden gems with a personalised route, quiet anchor spots, and a knowledgeable skipper, book directly through:
https://www.imaltaboattrips.com/ Use promo code BOAT26 for €20 off your 2026 booking.
