Best Private Boat Tours Malta 2026 — Prices, Options and How to Choose
Planning a boat tour in Malta and not sure where to start? You are in the right place. In this guide, we break down everything you need to know — from Malta boat tour prices and what is included, to which tour length suits your group and why private is always better than group.
At iMalta Boat Trips, we run fully private boat tours around Malta, Comino, and Gozo. Every trip is skippered by a local expert, tailored to your group, and priced honestly — with no hidden fees and no commission middlemen.
Why Private Boat Tours Are the Best Way to See Malta
Malta is an island. Therefore, the best views, the clearest water, and the most memorable experiences are all found at sea. However, not all boat tours are equal.
Large group ferries carry up to 60 strangers. They stop where the timetable says, stay for as long as the schedule allows, and anchor far from the spots that matter most. A private boat tour, on the other hand, works entirely around you.
Your skipper anchors where you want, stays as long as you like, and takes you to places that the big boats simply cannot reach. Furthermore, the whole boat is yours — no strangers, no noise, no rush.
For a full breakdown of why private wins every time, read our guide: Private Boat vs Group Tour Malta 2026. You can also read Are Private Boat Trips Worth It in Malta? and Private Boat vs Big Blue Lagoon Tour for more detail. Our friends at Outdoor Explorers Malta also have a great breakdown on private boat tours vs group tours if you want a second opinion.
Who Are iMalta Boat Trips?
We are a locally owned, family-run boat charter company based in Malta. Our skippers are locals who have spent their lives on these waters. We run small, private tours only — which means every guest gets a personal, unhurried experience.
We use fast, purpose-built Gaia boats designed for coastal exploration and shallow water navigation. These boats get you to places like Crystal Lagoon, Comino’s sea caves, and hidden bays that larger vessels cannot access.
Every trip departs from Cirkewwa in north Malta or Mgarr Harbour in Gozo — the two best starting points for exploring Comino and the Blue Lagoon quickly and efficiently.
Malta Boat Tour Prices — Full 2026 Breakdown
This is the section most people are looking for. Here is a clear, honest breakdown of every private boat tour we offer, with prices and direct booking links.
⏱️ 1 Hour Private Boat Tour — €100
Best for: Cruise liner guests, short stays, or a quick Blue Lagoon visit.
Our 1 hour private boat trip gets you to the Blue Lagoon or Crystal Lagoon in under 10 minutes from Cirkewwa. You swim, take in the scenery, and head back. It is a brilliant taster — and at €100 for the whole private boat, it is exceptional value.
⏱️ 2 Hour Private Boat Tour — €199
Best for: Couples, small families, or anyone wanting Blue Lagoon and Crystal Lagoon in one trip.
Our 2 hour private boat tour is our most popular choice. In two hours, you cover both lagoons, enjoy a proper swim, and have time to snorkel before heading back. Additionally, your skipper can include a cave or two depending on sea conditions.
⏱️ 3 Hour Private Boat Tour — €289
Best for: Groups who want a half-day adventure covering the lagoons, caves, and hidden bays.
The 3 hour private boat tour is the sweet spot for most groups. You visit the Blue Lagoon, Crystal Lagoon, Comino sea caves, Pigeon Rock, and Cominotto. There is also time for cliff diving if your group is feeling adventurous. In short, it covers the best of Comino in one half-day trip.
⏱️ 4 Hour Private Boat Tour — €369
Best for: Families and groups who want a full Comino experience plus a taste of Gozo.
The 4 hour private boat tour takes you around the full Comino coastline and crosses into Gozo waters. You explore Mgarr Harbour, the dramatic Gozo cliffs, and all the Comino highlights along the way. Consequently, this is the tour we recommend most for groups visiting Malta for a week or more.
⏱️ 6 Hour Private Boat Tour — €539
Best for: Groups who want a full day on the water exploring Comino and Gozo at a relaxed pace.
The 6 hour private boat tour gives your group a genuinely full day at sea. You have time to linger at every stop — swim longer in the Blue Lagoon, explore more caves, anchor in a hidden bay for lunch, and still cruise the Gozo coastline. Many guests bring a cooler full of food and drinks and treat this as a full day out.
⏱️ 8 Hour Private Boat Tour — €699
Best for: Those who want the ultimate Malta, Comino and Gozo experience in a single day.
Our 8 hour private boat tour is the most comprehensive trip we offer. A full day at sea means you cover everything — both lagoons, all the major caves, Pigeon Rock, Cominotto, the Gozo coastline, hidden bays, and secret swimming spots that most tourists never find. Furthermore, you have all the time in the world to snorkel, swim, and simply enjoy the water.
🌅 Sunset Boat Tour Malta —€289
Best for: Couples, anniversaries, honeymoons, and anyone who wants something truly magical.
Our Sunset Boat Tour is a 3-hour private evening cruise timed around the Maltese sunset. You drift along the Comino and Malta coastline as the light turns golden and the sea glows. It is one of the most romantic experiences in Malta — and one of the most memorable. Read more in our Sunset Cruise Malta guide. And if you are planning something extra special, we have helped many guests propose on a boat in Malta during our sunset tours.
How to Choose the Right Tour Length
Still unsure which option suits your group? Here is a simple way to decide.
- Short on time or on a cruise? → Go for the 1 hour or 2 hour trip
- Families or first-timers? → The 3 hour is perfect
- Want Comino and Gozo? → Book the 4 hour or 6 hour
- Want the full experience? → The 8 hour is for you
- Romantic evening? → Book the Sunset Tour
For a detailed guide on choosing your trip length, read our How Many Hours Do You Need guide.
What Is Included in Every iMalta Boat Tour?
Every private boat tour includes the following as standard:
- ✅ Fully private boat — your group only
- ✅ Experienced local skipper
- ✅ Snorkelling equipment for all passengers
- ✅ Fuel and all running costs
- ✅ Flexible, customised itinerary
- ✅ BYO food and drinks — bring a cooler on board
- ✅ Life vests available for all ages including young children
- ✅ Shaded seating area on board
There are no hidden fees and no extras you didn’t agree to. Read our full What’s Included in a Private Boat Rental Malta page for everything in detail.
What Will You See on a Malta Private Boat Tour?
💙 The Blue Lagoon
The Blue Lagoon is the most famous stretch of water in Malta — and for good reason. Its turquoise colour is extraordinary in person. On a private tour, your skipper anchors directly in the lagoon and you swim off the back of the boat. Read our full Blue Lagoon Malta Guide 2026 and our tips on visiting without the crowds.
🌊 Crystal Lagoon
Crystal Lagoon sits just south of the Blue Lagoon on Comino’s coastline. Its water is arguably even clearer, and because large group boats cannot enter it, it stays peaceful even in peak season. It is also one of the best snorkelling spots in Malta. Read our Crystal Lagoon Complete Guide 2026 for everything you need to know.
🕳️ Comino Sea Caves
The caves along Comino’s coastline are one of Malta’s best-kept secrets. Your skipper takes you inside as many as sea conditions allow. Some are open sea arches, others are deep caverns where the light turns the water electric blue. Read our Comino Caves Guide and Private Boat Caves Guide before you go.
🤿 Snorkelling
Snorkelling equipment is included in every trip. The waters around Comino are home to sea bream, wrasse, damselfish, painted comber, moray eels, octopus, and cuttlefish. Read our full Snorkelling Comino and Blue Lagoon guide for insider tips — including our captain’s trick for getting sea bream to feed from your hand.
🏝️ Gozo Coastline
On our longer tours, your skipper crosses into Gozo waters and explores the dramatic southern Gozo coastline. You visit Mgarr Harbour, hidden bays, and rocky headlands that most visitors never see. It adds a completely different dimension to the day.
🌊 Cliff Diving
For the adventurous guests, Comino and the Blue Lagoon area offer some of the best natural cliff diving spots in Malta. Your skipper identifies the safest ledges on the day. Read our Cliff Diving Malta guide for more detail.
What Our Guests Say
⭐⭐⭐⭐⭐ Rebecca Johnson — 6 months ago
“On our last day of a short trip we booked this private boat tour to beautiful lagoons, caves and bays. Before we even boarded the boat we knew it would be a good trip as we got a call from our fantastic skipper Pedro! What a vibe. A perfect host. He understood our itinerary and made sure we got the best out of the short time we had. We will be coming back and booking with him for the whole day! Very professional, very attentive to safety and our needs, with a personal relaxed approach. A skilled boatman, knowledgeable of the area and a lovely person. The booking process was very good too — Janet kept us informed and the communications were great.”
⭐⭐⭐⭐⭐ Vicky Chan — 6 months ago
“We got back from the most amazing private boat trip around Malta, and I had to share! Our skipper Pedro is a super friendly and knowledgeable local who knew all the best secret spots for swimming and snorkelling. The boat was spacious, clean, and had a shaded area. We spent the day jumping into crystal-clear blue water and exploring caves. It was the highlight of our Europe trip and my kids enjoyed it very much. Thank you Janet for arranging transportation to and from the pier — perfect timing! If you want a fun, relaxing, and genuinely memorable day, book this boat trip. Five stars without a doubt.”
⭐⭐⭐⭐⭐ Fiona Dennehy — 6 months ago
“Great private boat tour seeing the most beautiful spots around Malta. Upie was an amazing guide — so knowledgeable of the local and quiet spots and a great guy. Thanks so much!”
Is a Private Boat Tour in Malta Worth the Price?
Yes — and here is why. When you book a large group ferry to the Blue Lagoon, you typically pay €25–€40 per person. For a group of six, that is already €150–€240. However, you share that boat with 50 strangers, you get 45 minutes at the Blue Lagoon, and you have zero flexibility.
A 2-hour private boat tour with iMalta costs €199 for the whole boat. Split between six people, that is around €33 each. For that price, you get the whole boat to yourselves, a personal skipper, snorkelling equipment, and the freedom to go wherever you want.
The value is clear. Read our full analysis in Are Private Boat Trips Worth It in Malta? for the complete breakdown.
Tips for Booking the Best Boat Tour in Malta
Book Direct and Save
Always book directly with the operator rather than through a third-party platform. Platforms like Viator and GetYourGuide add a commission on top of the base price. Additionally, booking direct means you deal with the actual skipper and team — not a customer service agent in another country.
Choose a Small Private Tour
Small private tours give you flexibility, access to shallow spots, and a skipper who works entirely for your group. Outdoor Explorers Malta has a great guide on what makes a private boat tour different if you want more background before booking.
Consider the Time of Year
May through October is the best season for boat tours in Malta. Water temperatures are warmest from June to September. However, April is also a great time — the lagoons are less crowded and the scenery is just as stunning.
Think About Your Group
- Families with young children — any length works; our skippers are experienced with all ages
- Large groups — contact us first so we can match you to the right boat
- Couples — consider the sunset tour for something truly special
- Cruise guests — read our full Malta Cruise Excursion guide before booking
Explore Comino by Jet Ski
Want to experience Crystal Lagoon and the Comino coastline in a more adventurous way? Book a Malta Jet Ski Rental and ride through the same stunning waters independently. Crystal Lagoon is a key stop on the jet ski safari route, and no licence is required. It is the perfect way to add an extra thrill to your Malta holiday.
Frequently Asked Questions
How much does a private boat tour in Malta cost? Private boat tours with iMalta start from €100 for 1 hour. A 2-hour tour costs €199, a 3-hour tour costs €289, a 4-hour tour costs €369, a 6-hour tour costs €539, and an 8-hour tour costs €699. The sunset tour is also available as a 3-hour private evening cruise. All prices are for the whole private boat — not per person.
What is the best boat tour in Malta? The best boat tour in Malta is a private charter. You get flexibility, privacy, access to shallow spots like Crystal Lagoon, and a skipper who works entirely for your group. For most visitors, the 2-hour or 3-hour private tour offers the best combination of value and experience.
Where do boat tours in Malta depart from? iMalta boat tours depart from Cirkewwa in north Malta or Mgarr Harbour in Gozo. Both locations sit just minutes from Comino by sea, so you spend more time exploring and less time travelling.
Do I need a licence for a private boat tour in Malta? No. All iMalta tours are fully skippered private charters. Your skipper handles all the navigation. Read our guide on whether you need a licence to rent a boat in Malta for more information.
Can I bring food and drinks on a Malta boat tour? Yes. All iMalta private charters are BYO. Bring a cooler with whatever you like and enjoy it on the water.
What is included in a private boat tour? Every trip includes a private boat, local skipper, snorkelling equipment, fuel, and a flexible itinerary. Read our full What’s Included guide for the complete list.
Is the Blue Lagoon included in all boat tours? Yes. The Blue Lagoon is a stop on every tour from 1 hour upwards, subject to sea conditions. Read our Blue Lagoon Malta Guide 2026 for full details on what to expect when you arrive.
What happens if the weather is bad? Your safety always comes first. If conditions are unfavourable, your skipper adjusts the route to sheltered areas. Alternatively, we offer a full reschedule or refund. You will never be taken out in unsafe conditions.
Book the Best Private Boat Tour in Malta
Whether you want one hour or eight, a sunrise start or a golden-hour sunset, a family swim in the Blue Lagoon or a full-day adventure around Comino and Gozo — iMalta Boat Trips has the perfect private tour for your group.
We are a locally owned, family-run company. Our skippers are local experts. Every trip is private, personalised, and built around what you want to do.
👉 Book your private boat tour here — choose your duration and we will take care of everything else.
Have a question before you book? Get in touch with us — we are always happy to help.
